Package: schtools 0.4.1.9000

Kelly Sovacool

schtools: Schloss Lab Tools for Reproducible Microbiome Research

A collection of useful functions and example code created and used by the Schloss Lab for reproducible microbiome research. Perform common tasks like read files created by mothur <https://mothur.org/>, tidy up your microbiome data, and format R Markdown documents for publication. See the website <http://www.schlosslab.org/schtools/> for more information, documentation, and examples.

Authors:Kelly Sovacool [aut, cre], Nicholas Lesniak [aut], Sarah Lucas [aut], Courtney Armour [aut], Patrick Schloss [aut], Jacqueline Moltzau [ctb], Andrew Hannah [ctb], Nielson Baxter [ctb], Alyxandria Schubert [ctb], Kathryn Iverson [ctb]

schtools_0.4.1.9000.tar.gz
schtools_0.4.1.9000.zip(r-4.5)schtools_0.4.1.9000.zip(r-4.4)schtools_0.4.1.9000.zip(r-4.3)
schtools_0.4.1.9000.tgz(r-4.4-any)schtools_0.4.1.9000.tgz(r-4.3-any)
schtools_0.4.1.9000.tar.gz(r-4.5-noble)schtools_0.4.1.9000.tar.gz(r-4.4-noble)
schtools_0.4.1.9000.tgz(r-4.4-emscripten)schtools_0.4.1.9000.tgz(r-4.3-emscripten)
schtools.pdf |schtools.html✨
schtools/json (API)
NEWS

Peer review:

Bug tracker:https://github.com/schlosslab/schtools/issues

On CRAN:

microbiomemothur

19 exports 28 stars 2.65 score 22 dependencies 35 scripts 306 downloads

Last updated 1 years agofrom:b066acf96b. Checks:OK: 7. Indexed: yes.

Exports:.data%>%calc_relabunclose_enoughformat_numberget_wildcards_tblinline_hookis_nearly_wholeis_nondescload_depslog_snakemakeparse_taxpaste_oxford_listpool_taxon_countsread_distread_taxset_knitr_optstheme_lucastheme_sovacool

Dependencies:clicpp11dplyrfansiformatRgenericsgluelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr